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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SE3AB_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLWWIVLL IWTLIAPERG TVAQRSKSNV PRLKPSYKEM LESNNLLTFN GLANSSAYHT  60
   61 FLLDEERGRL FVGAKDHVLS FNLVDINMDQ QLISWPSSPS RRDECKWAGK DVQKECANFI 120
  121 KVLQPFNQTH LYACGTGAFH PVCAHVEVGK RSEDNTFRLG SSFENGRGKS PYDPKLQTAS 180
  181 MLIDGELYAG TSADFMGRDF AIFRTLGKHH PIRTEQHDSR WLNDPRFVSV HLIPESDNAE 240
  241 DDKIYLFFRE NAIDGEQISK ATHARIGQLC KNDFGGHRSL VNKWTTFLKA RLVCSVPGLN 300
  301 GIDTHFDELQ DVFLMSSKDP KNPIIYAVFT TSSNIFKGSA VCMYSMADIR RVFLGPYAHR 360
  361 DGPNYQWVPF LNRVPYPRPG TCPSKTFDGF ESTKDFPDDV ITFARSHPAM YNPVFPINNH 420
  421 PIIIKTDVDY QFTQIVVDRV EAEDGQYDVM FIGTDMGTVL KVVSIPRGTW HDLEEVLLEE 480
  481 MTVFREPTAI TAMELSTKQQ QLYLGSAIGV SQMPLHRCDV YGKACAECCL ARDPYCAWDG 540
  541 SQCSRYFPTA KRRTRRQDIR NGDPLTQCSD LQHHDEADGE AGLLDKTVYG VENSSSFLEC 600
  601 SPKSQRALIY WQFQRHGEDH KLEIKSDERV LGTEQGLLIR SLHQKDSGVY YCHAVEHGFI 660
  661 QTLLRLTLNV IPAEHLDDLL HRDPPDTNDP ANGKMWYRDF LSLINPPSPN SVDQLCEQVW 720
  721 KRERKQRRQK ANLLHASQSH TSQILHSSQS HAKWKLLQEN KKGRNRRTHE MQRAPRSV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle