YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	S17A5_SHEEP
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	37	0.93
Transmembrane Helix	38	58	0.77
Non-Cytoplasmic	59	109	0.83
Transmembrane Helix	110	129	0.86
Cytoplasmic	130	136	0.74
Transmembrane Helix	137	157	0.92
Non-Cytoplasmic	158	163	0.68
Transmembrane Helix	164	186	0.71
Cytoplasmic	187	198	0.79
Transmembrane Helix	199	221	0.86
Non-Cytoplasmic	222	227	0.77
Transmembrane Helix	228	248	0.94
Cytoplasmic	249	287	0.93
Transmembrane Helix	288	309	0.82
Non-Cytoplasmic	310	328	0.87
Transmembrane Helix	329	349	0.88
Cytoplasmic	350	361	0.88
Transmembrane Helix	362	385	0.88
Non-Cytoplasmic	386	390	0.81
Transmembrane Helix	391	412	0.89
Cytoplasmic	413	420	0.77
Transmembrane Helix	421	444	0.88
Non-Cytoplasmic	445	455	0.84
Transmembrane Helix	456	478	0.91
Cytoplasmic	479	495	0.92

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPVSDLAP SDGEEGSDRT PLLQRAPRAE PAPVCCSARY NLAFLSFFGF FVLYSLRVNL  60
   61 SVALVDMVDS NTTAKDNRTS YECAEHSAPI KVLHNQTGKK YRWDAETQGW ILGSFFYGYI 120
  121 ITQIPGGYVA SRSGGKLLLG FGIFATAIFT LFTPLAADFG VGALVALRAL EGLGEGVTYP 180
  181 AMHAMWSSWA PPLERSKLLS ISYAGAQLGT VVSLPLSGVI CYYMNWTYVF YFFGIVGIIW 240
  241 FILWICLVSD TPETHKTITP YEKEYILSSL KNQLSSQKSV PWIPMLKSLP LWAIVVAHFS 300
  301 YNWTFYTLLT LLPTYMKEVL RFNIQENGFL SAVPYLGCWL CMILSGQAAD NLRARWNFST 360
  361 LWVRRVFSLI GMIGPAIFLV AAGFIGCDYS LAVAFLTIST TLGGFCSSGF SINHLDIAPS 420
  421 YAGILLGITN TFATIPGMIG PIIARSLTPE NTIGEWQTVF CIAAAINVFG AIFFTLFAKG 480
  481 EVQNWAISDH QGHRN