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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42559651
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLVKSAGSP IYRTLRTLTT SNLMAATIAS AKDPLTGPRY EREPNVLRKK LASVVPGTVN  60
   61 LQVLGSGANG APAAVYLFTD QARYLFNCGE GTQRLAHEHK TRLSRLEQIF LTQNTWASCG 120
  121 GLPGLTLTIQ DAGVRDIGLH GPPHLGSMLQ SMRRFVVLKN LQVRPNDCSE GACFEDSILK 180
  181 VDSLPLINSE DPTKSVINYI CQLKPRAGAL NLVKCVEQGV PPGPLLGQLK NGNDITLPDG 240
  241 KVVRSVDVTE ASETALSFVF LDVPSENYLP ALLTHGKRLK KLGEEKLTEV ALVVHFTPYH 300
  301 ISSRQVYKDF VVESFSSEAQ HIYLSSPLNQ FSGYAAAHRI QHQLHQLAPQ VFPLLGEQLS 360
  361 CQSQTLSLNL KKTKLDEADS EDKANAKANE TEEQGVVAMT NYHLRPRKGL DRTLESKLTP 420
  421 EEYVKETHAV PGFLELLAKF KEEYSFPDNS ADSYPKIIFL GTGSCIPNKT RNVSSILIRT 480
  481 AIDAYVLLDC GEGTYGQIVR LYGHEKGQLI LRQLQAIYVS HLHADHHIGL IGLLRERRQL 540
  541 KPRADPLILL APRQIEPWLE FYNRQIETVE DAYTLVGNGE LLASPLSGEQ VERLGITSIS 600
  601 TCLVRHCPNS FGISLTLAAK HNSEPVKITY SGDTMPCQDL IDLGRDSTVL IHEATMEDDL 660
  661 EEEARLKTHS TVSQAIQQGR NMNARHTILT HFSQRYAKCP RLPSDEDMQR VAIAFDNMEV 720
  721 TIEDLQHYHK LYPALFAMYA EYTEELEQRA VKRELKQERK RKLAET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle