YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTFLB_ECOLI, PTV...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	131	0.63
Transmembrane Helix	132	157	0.83
Non-Cytoplasmic	158	173	0.55
Transmembrane Helix	174	197	0.82
Cytoplasmic	198	203	0.44
Transmembrane Helix	204	221	0.47
Non-Cytoplasmic	222	226	0.67
Transmembrane Helix	227	247	0.93
Cytoplasmic	248	258	0.79
Transmembrane Helix	259	281	0.91
Non-Cytoplasmic	282	301	0.78
Transmembrane Helix	302	323	0.85
Cytoplasmic	324	341	0.71
Transmembrane Helix	342	364	0.92
Non-Cytoplasmic	365	374	0.79
Transmembrane Helix	375	396	0.77
Cytoplasmic	397	402	0.74
Transmembrane Helix	403	426	0.83
Non-Cytoplasmic	427	442	0.86
Transmembrane Helix	443	467	0.87
Cytoplasmic	468	483	0.94

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSLRIVAI TNCPAGIAHT YMVAEALEQK ARSLGHTIKV ETQGSSGVEN RLSSEEIAAA  60
   61 DYVILATGRG LSGDDRARFA GKKVYEIAIS QALKNIDQIF SELPTNSQLF AADSGVKLGK 120
  121 QEVQSGSVMS HLMAGVSAAL PFVIGGGILV ALANMLVQFG LPYTDMSKGA PSFTWVVESI 180
  181 GYLGFTFMIP IMGAYIASSI ADKPAFAPAF LVCYLANDKA LLGTQSGAGF LGAVVLGLAI 240
  241 GYFVFWFRKV RLGKALQPLL GSMLIPFVTL LVFGVLTYYV IGPVMSDLMG GLLHFLNTIP 300
  301 PSMKFAAAFL VGAMLAFDMG GPINKTAWFF CFSLLEKHIY DWYAIVGVVA LMPPVAAGLA 360
  361 TFIAPKLFTR QEKEAASSAI VVGATVATEP AIPYALAAPL PMITANTLAG GITGVLVIAF 420
  421 GIKRLAPGLG IFDPLIGLMS PVGSFYLVLA IGLALNISFI IVLKGLWLRR KAKAAQQELV 480
  481 HEH