YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PTPW_ECOLI, PTPC...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISLLQAFA LGIIAFIAGL DMFNGLTHMH RPVVLGPLVG LVLGDLHTGI LTGGTLELVW  60
   61 MGLAPLAGAQ PPNVIIGTIV GTAFAITTGV KPDVAVGVAV PFAVAVQMGI TFLFSVMSGV 120
  121 MSRCDLATNP RRI

Type	Start	End	Confidence
Cytoplasmic	1	7	0.64
Transmembrane Helix	8	27	0.91
Non-Cytoplasmic	28	37	0.57
Transmembrane Helix	38	63	0.72
Cytoplasmic	64	70	0.50
Transmembrane Helix	71	90	0.80
Non-Cytoplasmic	91	97	0.64
Transmembrane Helix	98	121	0.84
Cytoplasmic	122	133	0.78