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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PQQL_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIIMRNLCF LLTLVATLLL PGRLIAAALP QDEKLITGQL DNGLRYMIYP HAHPKDQVNL  60
   61 WLQIHTGSLQ EEDNELGVAH FVEHMMFNGT KTWPGNKVIE TFESMGLRFG RDVNAYTSYD 120
  121 ETVYQVSLPT TQKQNLQQVM AIFSEWSNAA TFEKLEVDAE RGVITEEWRA HQDAKWRTSQ 180
  181 ARRPFLLANT RNLDREPIGL MDTVATVTPA QLRQFYQRWY QPNNMTFIVV GDIDSKEALA 240
  241 LIKDNLSKLP ANKAAENRVW PTKAENHLRF NIINDKENRV NGIALYYRLP MVQVNDEQSF 300
  301 IEQAEWSMLV QLFNQRLQER IQSGELKTIS GGTARSVKIA PDYQSLFFRV NARDDNMQDA 360
  361 ANALMAELAT IDQHGFSAEE LDDVKSTRLT WLKNAVDQQA ERDLRMLTSR LASSSLNNTP 420
  421 FLSPEETYQL SKRLWQQITV QSLAEKWQQL RKNQDAFWEQ MVNNEVAAKK ALSPAAILAL 480
  481 EKEYANKKLA AYVFPGRNLS LTVDADPQAE ISSKETLAEN LTSLTLSNGA RVILAKSAGE 540
  541 EQKLQIIAVS NKGDLSFPAQ QKSLIALANK AVSGSGVGEL SSSSLKRWSA ENSVTMSSKV 600
  601 SGMNTLLSVS ARTNNPEPGF QLINQRITHS TINDNIWASL QNAQIQALKT LDQRPAEKFA 660
  661 QQMYETRYAD DRTKLLQENQ IAQFTAADAL AADRQLFSSP ADITFVIVGN VAEDKLVALI 720
  721 TRYLGSIKHS DSPLAAGKPL TRATDNASVT VKEQNEPVAQ VSQWKRYDSR TPVNLPTRMA 780
  781 LDAFNVALAK DLRVNIREQA SGAYSVSSRL SVDPQAKDIS HLLAFTCQPE RHDELLTLAN 840
  841 EVMVKRLAKG ISEQELNEYQ QNVQRSLDIQ QRSVQQLANT IVNSLIQYDD PAAWTEQEQL 900
  901 LKQMTVENVN TAVKQYLSHP VNTYTGVLLP K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle