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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PQIB_ECOLI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNNGEAKI QKVKNWSPVW IFPIVTALIG AWVLFYHYSH QGPEVTLITA NAEGIEGGKT  60
   61 TIKSRSVDVG VVESATLADD LTHVEIKARL NSGMEKLLHK DTVFWVVKPQ IGREGISGLG 120
  121 TLLSGVYIEL QPGAKGSKMD KYDLLDSPPL APPDAKGIRV ILDSKKAGQL SPGDPVLFRG 180
  181 YRVGSVETST FDTQKRNISY QLFINAPYDR LVTNNVRFWK DSGIAVDLTS AGMRVEMGSL 240
  241 TTLLSGGVSF DVPEGLDLGQ PVAPKTAFVL YDDQKSIQDS LYTDHIDYLM FFKDSVRGLQ 300
  301 PGAPVEFRGI RLGTVSKVPF FAPNMRQTFN DDYRIPVLIR IEPERLKMQL GENADVVEHL 360
  361 GELLKRGLRG SLKTGNLVTG ALYVDLDFYP NTPAITGIRE FNGYQIIPTV SGGLAQIQQR 420
  421 LMEALDKINK LPLNPMIEQA TSTLSESQRT MKNLQTTLDS MNKILASQSM QQLPTDMQST 480
  481 LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK TLNEKSNALV FEAKDKKDPE 540
  541 PKRAKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle