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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PHR2_CANAL
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.71
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLKSLFPSI LAATSFVSSV AAEDLPAIEI VGNKFFYSNN GSQFYIKGIA YQQNNLDSNE  60
   61 SFVDPLANPE HCKRDIPYLE AVDYDSNVIR VYALDTSQDH TECMQMLQDA GIYVIADLSQ 120
  121 PDESINRDDP SWDLDLFERY TSVVDLFHNY TNILGFFAGN EVTNKKSNTD ASAFVKAAIR 180
  181 DTKAYIKSKG YRSIPVGYSA NDDSAIRVSL ADYFACGDED EAADFFGINM YEWCGDSSYK 240
  241 ASGYESATND YKNLGIPIFF SEYGCNEVRP RKFTEVATLF GDQMTPVWSG GIVYMYFEEE 300
  301 NNYGLVSIKD NTVSTLKDYS YYSSEIKDIH PSSAKASAES ASSISRTTCP TNTNNWEAST 360
  361 NLPPTPDKEV CECMSASLKC VVDDKVDSDD YSDLFSYICA KIDCDGINAN GTTGEYGAYS 420
  421 PCHSKDKLSF VMNLYYEQNK ESKSACDFGG SASLQSAKTA SSCSAYLSSA GSSGLGTVSG 480
  481 TVRTDTSQST SDSGSGSSSS SSSSSSSSSS GSSGSKSAAS IVSVNLLTKI ATIGISIVVG 540
  541 FGLITM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle