YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX10_PICPA
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPSEEIKLR AVSPRPDFKA NYLEFANAPA IVRANQKDSY FETVLRDKLQ NVIQIFKGQR  60
   61 FTHTHPEEIG VAAKALYLSL TTLLGTKTLG EEYVDLIYVS RDGKRIPRYL ARAGFIFAYA 120
  121 ILPYFLTRLF RRLKSSSTPK DEVTEEKINK ELPISLRIEK YLSNMSYSKV LDTIMNLHIA 180
  181 VFYFSGQFYN ISKRFFSMRY AFGHKINKER TPNGNYELLG GLIVLQLVMK SLGGFKGLIG 240
  241 SFTGNDEHDE SNLRANNKDI MYGIPSEEEQ EEAKQQLGII DLSDPGQLPY IPESSRQCML 300
  301 CLSYMTNPTA ANCGHCFCWS CIIDWCKERQ TVLCVGKKCW NSNCYHCIRL FYIPTLNKIC 360
  361 FFFLLSFLSV RAASKEFKST KEEFAELFNE ELADIAGEDP HCPGPFPTGR TLGYFLVVF

Type	Start	End	Confidence
Cytoplasmic	1	108	0.91
Transmembrane Helix	109	127	0.90
Non-Cytoplasmic	128	419	0.88