YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12643549
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNLPCLGTA GGSGLGGIAG KPSPTMEAVE ASTASHRHST SSYFATTYYH LTDDECHSGV  60
   61 NQLGGVFVGG RPLPDSTRQK IVELAHSGAR PCDISRILQV SNGCVSKILG RYYETGSIRP 120
  121 RAIGGSKPRV ATAEVVSKIS QYKRECPSIF AWEIRDRLLQ ENVCTNDNIP SVSSINRVLR 180
  181 NLAAQKEQQS TGSGSSSTSA GNSISAKVSV SIGGNVSNVA SGSRGTLSSS TDLMQTATPL 240
  241 NSSESGGASN SGEGSEQEAI YEKLRLLNTQ HAAGPGPLEP ARAAPLVGQS PNHLGTRSSH 300
  301 PQLVHGNHQA LQQHQQQSWP PRHYSGSWYP TSLSEIPISS APNIASVTAY ASGPSLAHSL 360
  361 SPPNDIESLA SIGHQRNCPV ATEDIHLKKE LDGHQSDETG SGEGENSNGG ASNIGNTEDD 420
  421 QARLILKRKL QRNRTSFTND QIDSLEKEFE RTHYPDVFAR ERLAGKIGLP EARIQVWFSN 480
  481 RRAKWRREEK LRNQRRTPNS TGASATSSST SATASLTDSP NSLSACSSLL SGSAGGPSVS 540
  541 TINGLSSPST LSTNVNAPTL GAGIDSSESP TPIPHIRPSC TSDNDNGRQS EDCRRVCSPC 600
  601 PLGVGGHQNT HHIQSNGHAQ GHALVPAISP RLNFNSGSFG AMYSNMHHTA LSMSDSYGAV 660
  661 TPIPSFNHSA VGPLAPPSPI PQQGDLTPSS LYPCHMTLRP PPMAPAHHHI VPGDGGRPAG 720
  721 VGLGSGQSAN LGASCSGSGY EVLSAYALPP PPMASSSAAD SSFSAASSAS ANVTPHHTIA 780
  781 QESCPSPCSS ASHFGVAHSS GFSSDPISPA VSSYAHMSYN YASSANTMTP SSASGTSAHV 840
  841 APGKQQFFAS CFYSPWV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle