YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|398591
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVLLGLV AFSECIVKIP LRRVKTMRNT LSGKKMLNSF LKEHAYRLSQ ISFRASNLTI  60
   61 HPLRNIMDML YVGNITIGTP PQEFQVVFDT GSSDLLVPSI NCLSPTKRPC SKQDKFKHHQ 120
  121 SSTFRFTNDT FRIYFGSGTM RGFVAHDTVR IGDLVSTDQP FGLIFLESWL DIPFDGILGL 180
  181 NYPKISFSGA IPIFDKLKNE GAFSEPVFAF YLNKDKQEGS VVMFGGVDHR YYKGELNWVP 240
  241 LIHPGEWSIP LDRISMRRKV IACSGGCEAL VGTGTSLILG PRTVVENIQK HIGATQQCFE 300
  301 YFVSCSAVYA LPSIVFTING INYPVPPQAY LVKDSRGQCY SPFQVNRANP SAENWILGDV 360
  361 FLRRYFSVFD RGNDRIGLAR AV

Type	Start	End	Confidence
Signal Peptide	1	15	0.94
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	382	0.99