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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|165926088, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQRNLLLI ALLFVSFMIW QAWQVDNNPQ PTAQTTQQTT NTATGDKASQ AVPGSGQGQL  60
   61 ITVKTDVLSL TINTRGGDIE QANLLAYPDT LGSSNTFELL ETTPSFVYQA QSGLTGKNGP 120
  121 DNPANGDRPL FEVPQTSFVL ADGQDELRIP LTFTSKDGSV FIKTFVLKRN DYAIGVDYHV 180
  181 NNASAAPLEL TLFGQLKQSI NLPKKRDTGS NNFALQTYRG AAYSSDETKY KKYSFSDIED 240
  241 KNLDITTKGG WVAMLQQYFA TAWIPAANET NTFYSAELGN GLAAIGFKGA PVVIQPGEQK 300
  301 QLSATLWVGP EIQNKMAEIA PHLDLTVDYG WLWFISQPLF KLLKFIHSFV GNWGFSIIVI 360
  361 TFIVRGIMYP LTKAQYTSMA KMRLLQPKLA AMRERIGDDK QRMSQEMMAL YKAEKVNPLG 420
  421 GCLPLIIQMP IFLALYYMLM SSVELRHAPF ILWIHDLSAQ DPYYILPILM GITMYFIQKM 480
  481 SPTTVTDPMQ QKIMTFMPVI FTVFFLWFPA GLVLYYIVSN LVTILQQQLI YRGLEKRGLH 540
  541 SREKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle