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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPPA_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNITKRSLV AAGVLAALMA GNVALAADVP AGVTLAEKQT LVRNNGSEVQ SLDPHKIEGV  60
   61 PESNISRDLF EGLLVSDLDG HPAPGVAESW DNKDAKVWTF HLRKDAKWSD GTPVTAQDFV 120
  121 YSWQRSVDPN TASPYASYLQ YGHIAGIDEI LEGKKPITDL GVKAIDDHTL EVTLSEPVPY 180
  181 FYKLLVHPST SPVPKAAIEK FGEKWTQPGN IVTNGAYTLK DWVVNERIVL ERSPTYWNNA 240
  241 KTVINQVTYL PIASEVTDVN RYRSGEIDMT NNSMPIELFQ KLKKEIPDEV HVDPYLCTYY 300
  301 YEINNQKPPF NDVRVRTALK LGMDRDIIVN KVKAQGNMPA YGYTPPYTDG AKLTQPEWFG 360
  361 WSQEKRNEEA KKLLAEAGYT ADKPLTINLL YNTSDLHKKL AIAASSLWKK NIGVNVKLVN 420
  421 QEWKTFLDTR HQGTFDVARA GWCADYNEPT SFLNTMLSNS SMNTAHYKSP AFDSIMAETL 480
  481 KVTDEAQRTA LYTKAEQQLD KDSAIVPVYY YVNARLVKPW VGGYTGKDPL DNTYTRNMYI 540
  541 VKH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle