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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NMPC_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTVAISA VAASVLMAMS AQAAEIYNKD SNKLDLYGKV NAKHYFSSND ADDGDTTYAR  60
   61 LGFKGETQIN DQLTGFGQWE YEFKGNRAES QGSSKDKTRL AFAGLKFGDY GSIDYGRNYG 120
  121 VAYDIGAWTD VLPEFGGDTW TQTDVFMTQR ATGVATYRNN DFFGLVDGLN FAAQYQGKND 180
  181 RSDFDNYTEG NGDGFGFSAT YEYEGFGIGA TYAKSDRTDT QVNAGKVLPE VFASGKNAEV 240
  241 WAAGLKYDAN NIYLATTYSE TQNMTVFADH FVANKAQNFE AVAQYQFDFG LRPSVAYLQS 300
  301 KGKDLGVWGD QDLVKYVDVG ATYYFNKNMS TFVDYKINLL DKNDFTKALG VSTDDIVAVG 360
  361 LVYQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle