YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SL9A3_DIDVI
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLGVRGTRR EFRFPVWGLL LLALWMLPRA LGVEEIPGPD SHEKQGFQIV TFKWHHVQDP  60
   61 YIIALWILVA SLAKIVFHLS HKVTSVVPES ALLIVLGLIL GGIVWAADHI ASFTLTPTVF 120
  121 FFYLLPPIVL DAGYFMPNRL FFGNLGTILL YAVIGTVWNA ATTGLSLYGV YLSGIMGDLS 180
  181 IGLLDFLLFG SLIAAVDPVA VLAVFEEVHV NDVLFIIVFG ESLLNDAVTV VLYNVFDSFV 240
  241 SLGADKVTGV DCVKGIVSFF VVSLGGTLIG IIFAFLLSLV TRFTKHVRII EPGFVFIISY 300
  301 LSYLTSEMLS LSAILAITFC GICCQKYVKA NISEQSATTV RYTMKMLASG AETIIFMFLG 360
  361 ISAVDPAIWT WNTAFILLTL VFISVYRAIG VVLQTWLLNK YRMVQLEIID QVVMSYGGLR 420
  421 GAVAYALVVL LDEKKVKEKN LFVSTTIIVV FFTVIFQGLT IKPLVQWLKV KKSEHREPKL 480
  481 NEKLHGRAFD HILSAIEDIS GQIGHNYLRD KWSNFDRKVL SKLLMRRSAQ KSRDRILNVF 540
  541 HELNLKDAIS YVAEGERRGS LAFIRSPSTD NIVNVDFSTP RPSTVEASVS YLLRENVSTV 600
  601 CLDMQALEQR RKSIRDTEDT VTHHTLQQYL YKPRQEYKHL YSRHELTSNE DEKQDKEIFH 660
  661 RTMRKRLESF KSTKLGINQT KKTAKLYKRE RGQKRRNSSI PNGKIPMESP TRDFTFKEKE 720
  721 LEFSDPEETN EYEAEEMSGG IEFLANVTQD TATDSTTGID NPVFSPEEDQ SIFTKVPPWL 780
  781 SPEETVVPSQ RARVQIPYSP SNFRRLTPIR LSTKSVDSFL LADSPEERPR SFLPESTHM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle