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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: l(3)mbn-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKLMAFVC ALLLLCTLTH VLSAATTVRP YKFGFTIDEQ QHRAEKRDER GIIMGEFGFI  60
   61 TADGIYHVTV YATDEEGKFR IISMKSYPYA GPVGSKSVPV TTTPKVLLPA APVALPKYNF 120
  121 NSEACSGCFL KKSPPKTEIR TLSQPLAPVQ PGKPDGSSDI GLNVQLPFRE SIAQTVASRL 180
  181 GLLQDTLQTS NTNTNAPNTK TIELGLNIAM STYYTTKNAV TGHVSTQTSN SQTPSANTKI 240
  241 DYNVGVVEKA SPPVYRPLNI RLNEDVMRQA ITYGNTIPGH VPLPNQPLVE TSLLPASQVK 300
  301 IFALDGNAKV PLASNIQSVA QHPNAGLNAK VPLASNIQSV AQHPNAGLNA KVPLASNIQS 360
  361 VAQHPNAGLK NINRSGVSSA KTLANTKTRP PHTFNPHQTP LLSSATAPGI SGVTANTPTG 420
  421 NVPSNGGGIA AGKAPGNPQA GGSGGIIGAG APGGRKVSAG GIGSGSAIGG VSGGSKASGN 480
  481 GGAIGSGSAI GGGATGSKAS GFGFGSNIGG GVSGSKPSGF GSESKIGGPD SGSKALGFGS 540
  541 GSKIGGGITG TKASGFGGEI GSGRGSASSA TGDLYKFKYI LDYNGHEETG GRNGDKQGSY 600
  601 FAIGEDAVQR TIEYIANEFG FQPHVSWRKL DAKEALPEEN SLKHYEFKWF NQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle