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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LPHN2_MOUSE, LHN...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKGPDLSNCT SHWVNQLAQK IRSGENAASL ANELAKHTKG HVFAGDVSSS VRLMEQLVDI  60
   61 LDAQLQELKP SEKDSAGRSY NKAIVDTVDN LLRAEALESW KHMNSSEQAH TATMLLDTLE 120
  121 EGAFVLADNL LEPTRVSMPT ENIVLEVAVL STEGQVQDFK FPLGLKGLGS SIQLSANTVK 180
  181 QNSRNGLAKL VFIIYRSLGQ FLSTENATIK LGADLMGRNS TIAVNSPVIS VSINKESSRV 240
  241 YLTDPVLFTL PHIDPDNYFN ANCSFWNYSE RTMMGYWSTQ GCKLVDTNKT RTTCACSHLT 300
  301 NFAILMAHRE IAYKDGVHHL LLTVITWVGI VVSLVCLAIC IFTFCFFRGL QSDRNTIHKN 360
  361 LCINLFIAEF IFLIGIDKTK YTIACPVFAG LLHFFFLAAF SWMCLEGVQL YLMLVEVFES 420
  421 EYSRKKYYYV AGYLFPATVV GVSAAIDYKS YGTVQACWLH VDNYFIWSFI GPVTFIILLN 480
  481 IIFLVITLCK MVKHSNTLKP DSSRLENIKS WVLGAFALLC LLGLTWSFGL LFVNEETVVM 540
  541 AYLFTAFNAF QGLFIFIFHC ALQKKVRKEY GKCFRHWYCC GGLPTESPHS SVKASTTRTS 600
  601 ARYSSGTQSR IRRMWNDTVR KQSESSFISG DINSTSTLNQ GHSLNNARDT SAMDTLPLNG 660
  661 NFNNSYSLRK ADYHDGVQVV DCGLSLNDTA FEKMIISELV HNNLRGGNKT HNLELKLPVK 720
  721 PVIGGSSSED DAIVADASSL MHGDNPGLEF RHKELEAPLI PQRTHSLLYQ PQKKVKPEAT 780
  781 DSYVSQLTAE ADDHLQSPNR DSLYTSMPNL RDSPYPESSP DMAEDLSPSR RSENEDIYYK 840
  841 SMPNLGAGRH LHMCYQISRG NSDGYIIPIN KEGCIPEGDV REGQMQLVTS L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle