YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LEP_PSEFL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNFPLLLV IAVAVCGLLA LLDLVFFAPR RRSAIASYQG SVSQPDAVVI EKLNKEPLLV  60
   61 EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLDVGDF ILVNKFSYGI RLPVIDKKVI 120
  121 EVGDPQRGDV MVFRYPSDPN VNYIKRVVGL PGDVVRYTSD KRLFINGESV AEKLLGAEPN 180
  181 TLGSAELYQE KLGAVEHEIR KEMSRYRAMP DGQWKVPAGH YFMMGDNRDN SNDSRYWDDP 240
  241 NIPKDLLGMV PDENIVGKAF AVWMSWPEPK LSHLPNFSRV GLIK

Type	Start	End	Confidence
Signal Peptide	1	27	0.57
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	284	0.86