YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LEP4_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMLLPLFIL VGFIADYFVN AIAYHLSPLE DKTALTFRQV LVHFRQKKYA WHDTVPLILC  60
   61 VAAAIACALA PFTPIVTGAL FLYFCFVLTL SVIDFRTQLL PDKLTLPLLW LGLVFNAQYG 120
  121 LIDLHDAVYG AVAGYGVLWC VYWGVWLVCH KEGLGYGDFK LLAAAGAWCG WQTLPMILLI 180
  181 ASLGGIGYAI VSQLLQRRTI TTIAFGPWLA LGSMINLGYL AWISY

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.72
Transmembrane Helix	7	28	0.84
Cytoplasmic	29	48	0.89
Transmembrane Helix	49	70	0.88
Non-Cytoplasmic	71	74	0.62
Transmembrane Helix	75	95	0.84
Cytoplasmic	96	103	0.75
Transmembrane Helix	104	122	0.82
Non-Cytoplasmic	123	127	0.69
Transmembrane Helix	128	149	0.82
Cytoplasmic	150	167	0.63
Transmembrane Helix	168	191	0.87
Non-Cytoplasmic	192	199	0.64
Transmembrane Helix	200	223	0.88
Cytoplasmic	224	225	0.67