YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACSL1_CAVPO
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAHELLQYF RLPELVDIRQ YVRTLPTNTL MGFGAFAALT TFWYATRPKA LKPPCDLSMQ  60
   61 SVEVAGSDGA RRSTLLDSDE PLVYFYDDVR TLYDVFQRGI QVSNNGPCLG SRKPDQPYEW 120
  121 LSYKQVEDLS ECIGSALLQK GFQASPDQFI GIFAQNRPEW VIIEQACFAY SMVVVPLYDT 180
  181 LGADAITYIV NKAELSVIFA DKPEKARILL ESVENKLTPG LKIIVVMDSY GSELVEQGKK 240
  241 CGVEVISLKA MEGLGRANRR KPKPPEPDDL AVICFTSGTT GNPKGAMITH KNVVSDCSAF 300
  301 VKATEKALVL NASDIHISFL PLAHMYEQLL QCVMLCHGAK IGFFQGDIRL LMDDLKALQP 360
  361 TIFPVVPRLL NRMFDRIFAQ ANTTVKRWLL DFASKRKEAE LRSGIIRNNS VWDKLIFHKI 420
  421 QSSLGGKVRL MVTGAAPVSA TVLTFLRAAL GCQFYEGYGQ TECTAGCSLS VPGDWTAGHV 480
  481 GAPMPCNFIK LVDVEEMNYM AAMGEGEVCV KGPNVFKGYL KDPAKTAEAL DKDGWLHTGD 540
  541 IGKWLPNGTL KIIDRKKHIF KLAQGEYIAP EKIENIYVRS EPVAQVFVHG ESLQAFLIAI 600
  601 VVPDAESLAS WARKRGFEGS FEELCRNKDV KKAILEDMVR IGKDSGLKSF EQVRGIALHP 660
  661 ELFSVDNGLL TPTMKAKRPE LRNYFRSQID ELYSTIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle