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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LCAT_PAPAN
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPGSPWQW VPLLLGLLLP PAAPFWLLNV LFPPHTTPKA ELSNHTRPVI LVPGCLGNQL  60
   61 EAKLDKPDVV NWMCYRKTED FFTIWLDLNM FLPLGVDCWI DNTRVVYNRS SGLVSNAPGV 120
  121 QIRVPGFGKT YSVEYLDSSK LAGYLHTLVQ NLVNNGYVRD ETVRAAPYDW RLEPGQQEEY 180
  181 YHKLAGLVEE MHAAYGKPVF LIGHSLGCLH LLYFLLRQPQ AWKDRFIDGF ISLGAPWGGS 240
  241 IKPMLVLASG DNQGIPIMSS IKLKEEQRIT TTSPWMFPSR LAWPEDHVFI STPSFNYTGR 300
  301 DFQRFFADLH FEEGWYMWLQ SRDLLAGLPA PGVEVYCLYG VGLPTPRTYI YDHGFPYTDP 360
  361 VDVLYEDGDD TVATRSTELC GLWQGRQPQP VHLLPLRGIQ HLNMVFSNQT LEHINAILLG 420
  421 AYRQGPPASL TASPEPPPPE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle