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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KIT_CHICK
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGAHLAWEL AHAVLLLSLI PAGGSVPHEE SSLVVNKGEE LRLKCNEEGP VTWNFQNSDP  60
   61 SAKTRISNEK EWHTKNATIR DIGRYECKSK GSIVNSFYVF VKDPNVLFLV DSLIYGKEDS 120
  121 DILLVCPLTD PDVLNFTLRK CDGKPLPKNM TFIPNPQKGI IIKNVQRSFK GCYQCLAKHN 180
  181 GVEKISEHIF LNVRPVHKAL PVITLSKSYE LLKEGEEFEV TCIITDVDSS VKASWISYKS 240
  241 AIVTSKSRNL GDYGYERKLT LNIRSVGVND SGEFTCQAEN PFGKTNATVT LKALAKGFVR 300
  301 LFATMNTTID INAGQNGNLT VEYEAYPKPK EEVWMYMNET LQNSSDHYVK FKTVGNNSYT 360
  361 SELHLTRLKG TEGGIYTFFV SNSDASSSVT FNVYVKTKPE ILTLDMLGND ILQCVATGFP 420
  421 APTIYWYFCP GTEQRCLDSP TISPMDVKVS YTNSSVPSFE RILVESTVNA SMFKSTGTIC 480
  481 CEASSNGDKS SVFFNFAIKE QIRTHTLFTP LLIAFGVAAG LMCIIVMILV YIYLQKPKYE 540
  541 VQWKVVEEIN GNNYVYIDPT QLPYDHKWEF PRNRLSFGKT LGAGAFGKVV EATAYGLFKS 600
  601 DAAMTVAVKM LKPSAHLTER EALMSELKVL SYLGNHINIV NLLGACTIGG PTLVITEYCC 660
  661 YGDLLNFLRR KRDSFICPKH EEHAEAAVYE NLLHQAEPTA DAVNEYMDMK PGVSYAVPPK 720
  721 ADKKRPVKSG SYTDQDVTLS MLEDDELALD VEDLLSFSYQ VAKGMSFLAS KNCIHRDLAA 780
  781 RNILLTHGRI TKICDFGLAR DIRNDSNYVV KGNARLPVKW MAPESIFNCV YTFESDVWSY 840
  841 GILLWELFSL GSSPYPGMPV DSKFYKMIKE GYRMFSPECS PPEMYDIMKS CWDADPLQRP 900
  901 TFKQIVQLIE QQLSDNAPRV YANFSTPPST QGNATDHSVR INSVGSSASS TQPLLVREDV 960
  961 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle