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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|384325, gi|218326
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHHKPLLPT SSHAAPTSST RKDLLFVLCG LLFLSSLVAY GGYRASGVPH AHLSSPTSNH  60
   61 QQDHQSPTSL PSSKWYPVSR GVSSGVSEKS SNLLFAGEGG ASEAFPWDNS MLSWQRTSFH 120
  121 FQPEKNWMND PNGPMYYKGW YHFFYQYNPN GAVWGDIVWG HAVSRDMIHW LHLPLAMVAD 180
  181 QWYDKQGVWT GSATILPNGE IIMLYTGSTN ESVQVQNLAY PADPSDPLLL DWIKHTGNPV 240
  241 LVPPPGIGAK DFRDPTTAWL TSEGKWRITI GSKLNKTGIA LVYDTEDFKT YELKEGLLRA 300
  301 VPGTGMWECV DFFPVSKKNG NGLDTSVNGA EVKHVMKVSL DDDRHDYYAI GTYDDNKVLF 360
  361 TPDDVKNDVG VGLRYDYGIF YASKTFYDQN KDRRILWGWI GESDSEYADV TKGWASVQSI 420
  421 PRTVRLDTKT GSNLLQWPVD EVESLRLRSD EFKSLKAKPG SVVSLDIETA TQLDVVAEFE 480
  481 IDTESLEKTA ESNEEFTCSS SGGAAQRGAL GPFGLLVLAD EGLSEYTPVY FYVIKGRNGN 540
  541 LRTSFCSDQS RSSQANDVRK QIFGSVVPVL KGEKFSLRML VDHSIVESFA QGGRTCVTSR 600
  601 VYPTKAIYGA ARLFLFNNAT EATVTASLKV WQMNSAFIRP FPFNPDQKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle