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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: INVA_SOLLC
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQCYDPEN SASRYTLLPD QPDSGHRKSL KIISGIFLSV FLLLSVAFFP ILNNQSPDLQ  60
   61 IDSRSPAPPS RGVSQGVSDK TFRDVAGASH VSYAWSNAML SWQRTAYHFQ PQKNWMNDPN 120
  121 GPLYHKGWYH LFYQYNPDSA IWGNITWGHA VSKDLIHWLY LPFAMVPDQW YDINGVWTGS 180
  181 ATILPDGQIM MLYTGDTDDY VQVQNLAYPA NLSDPLLLDW VKFKGNPVLV PPPGIGVKDF 240
  241 RDPTTAWTGP QNGQWLLTIG SKIGKTGVAL VYETSNFTSF KLLDGVLHAV PGTGMWECVD 300
  301 FYPVSTKKTN GLDTSYNGPG VKHVLKASLD DNKQDHYAIG TYDLGKNKWT PDNPELDCGI 360
  361 GLRLDYGKYY ASKTFYDPKK ERRVLWGWIG ETDSESADLQ KGWASVQSIP RTVLYDKKTG 420
  421 THLLQWPVEE IESLRVGDPT VKQVDLQPGS IELLRVDSAA ELDIEASFEV DKVALQGIIE 480
  481 ADHVGFSCST SGGAASRGIL GPFGVIVIAD QTLSELTPVY FYISKGADGR AETHFCADQT 540
  541 RSSEAPGVGK QVYGSSVPVL DGEKHSMRLL VDHSIVESFA QGGRTVITSR IYPTKAVNGA 600
  601 ARLFVFNNAT GASVTASVKI WSLESANIQS FPLQDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle