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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: INLA_LISMO
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.75
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKRYVWLK SILVAILVFG SGVWINTSNG TNAQAATITQ DTPINQIFTD TALAEKMKTV  60
   61 LGKTNVTDTV SQTDLDQVTT LQADRLGIKS IDGVEYLNNL TQINFSNNQL TDITPLKNLT 120
  121 KLVDILMNNN QIADITPLAN LTNLTGLTLF NNQITDIDPL KNLTNLNRLE LSSNTISDIS 180
  181 ALSGLTSLQQ LSFGNQVTDL KPLANLTTLE RLDISSNKVS DISVLAKLTN LESLIATNNQ 240
  241 ISDITPLGIL TNLDELSLNG NQLKDIGTLA SLTNLTDLDL ANNQISNLAP LSGLTKLTEL 300
  301 KLGANQISNI SPLAGLTALT NLELNENQLE DISPISNLKN LTYLTLYFNN ISDISPVSSL 360
  361 TKLQRLFFYN NKVSDVSSLA NLTNINWLSA GHNQISDLTP LANLTRITQL GLNDQAWTNA 420
  421 PVNYKANVSI PNTVKNVTGA LIAPATISDG GSYTEPDITW NLPSYTNEVS YTFSQPVTIG 480
  481 KGTTTFSGTV TQPLKAIFNV KFHVDGKETT KEVEAGNLLT EPAKPVKEGH TFVGWFDAQT 540
  541 GGTKWNFSTD KMPTNDINLY AQFSINSYTA TFDNDGVTTS QTVDYQGLLQ EPTAPTKEGY 600
  601 TFKGWYDAKT GGDKWDFATS KMPAKNITLY AQYSANSYTA TFDVDGKSTT QAVDYQGLLK 660
  661 EPKAPTKAGY TFKGWYDEKT DGKKWDFATD KMPANDITLY AQFTKNPVAP PTTGGNTPPT 720
  721 TNNGGNTTPP SANIPGSDTS NTSTGNSAST TSTMNAYDPY NSKEASLPTT GDSDNALYLL 780
  781 LGLLAVGTAM ALTKKARASK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle