YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HTOA_HAEIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTRFVLNS IALGLSVLST SFVAHVAQAT LPSFVSEQNS LAPMLEKVQP AVVTLSVEGK  60
   61 AKVDSRSPFL DDIPEEFKFF FGDRFAEQFG GRGESKRNFR GLGSGVIINA SKGYVLTNNH 120
  121 VIDGADKITV QLQDGREFKA KLVGKDEQSD IALVQLEKPS NLTEIKFADS DKLRVGDFTV 180
  181 AIGNPFGLGQ TVTSGIVSAL GRSTGSDSGT YENYIQTDAA VNRGNSGGAL VNLNGELIGI 240
  241 NTAIISPSGG NAGIAFAIPS NQASNLVQQI LEFGQVRRGL LGIKGGELNA DLAKAFNVSA 300
  301 QQGAFVSEVL PKSAAEKAGL KAGDIITAMN GQKISSFAEI RAKIATTGAG KEISLTYLRD 360
  361 GKSHDVKMKL QADDSSQLSS KTELPALDGA TLKDYDAKGV KGIEITKIQP NSLAAQRGLK 420
  421 SGDIIIGINR QMIENIRELN KVLETEPSAV ALNILRGDSN FYLLVQ

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	466	0.99