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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BIODA_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPVTATLIR HRLRHLRHRI RFKSTSVSPF HLPLNHPTYL IWSANTSLGK TLVSTGIAAS  60
   61 FLLQQPSSSA TKLLYLKPIQ TGFPSDSDSR FVFSKLDSLS LRRQIPISIS NSVLHSSLPA 120
  121 AKSLGLNVEV SESGMCSLNF RDEKTVTGAP ELLCKTLYAW EAAISPHLAA ERENATVEDS 180
  181 VVLQMIEKCL KEEMECGVKS EKSDLLCLVE TAGGVASPGP SGTLQCDLYR PFRLPGILVG 240
  241 DGRLGGISGT IAAYESLKLR GYDIAAVVFE DHGLVNEVPL TSYLRNKVPV LVLPPVPKDP 300
  301 SDDLIEWFVE SDGVFKALKE TMVLANLERL ERLNGMAKLA GEVFWWPFTQ HKLVHQETVT 360
  361 VIDSRCGENF SIYKASDNSS LSQQFDACAS WWTQGPDPTF QAELAREMGY TAARFGHVMF 420
  421 PENVYEPALK CAELLLDGVG KGWASRVYFS DNGSTAIEIA LKMAFRKFCV DHNFCEATEE 480
  481 EKHIVVKVIA LRGSYHGDTL GAMEAQAPSP YTGFLQQPWY TGRGLFLDPP TVFLSNGSWN 540
  541 ISLPESFSEI APEYGTFTSR DEIFDKSRDA STLARIYSAY LSKHLQEHSG VRQSAHVGAL 600
  601 IIEPVIHGAG GMHMVDPLFQ RVLVNECRNR KIPVIFDEVF TGFWRLGVET TTELLGCKPD 660
  661 IACFAKLLTG GMVPLAVTLA TDAVFDSFSG DSKLKALLHG HSYSAHAMGC ATAAKAIQWF 720
  721 KDPETNHNIT SQGKTLRELW DEELVQQISS HSAVQRVVVI GTLFALELKA DASNSGYASL 780
  781 YAKSLLIMLR EDGIFTRPLG NVIYLMCGPC TSPEICRRLL TKLYKRLGEF NRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle