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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HOFQ_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQWIAALLL MLIPGVQAAK PQKVTLMVDD VPVAQVLQAL AEQEKLNLVV SPDVSGTVSL  60
   61 HLTDVPWKQA LQTVVKSAGL ITRQEGNILS VHSIAWQNNN IARQEAEQAR AQANLPLENR 120
  121 SITLQYADAG ELAKAGEKLL SAKGSMTVDK RTNRLLLRDN KTALSALEQW VAQMDLPVGQ 180
  181 VELSAHIVTI NEKSLRELGV KWTLADAQHA GGVGQVTTLG SDLSVATATT HVGFNIGRIN 240
  241 GRLLDLELSA LEQKQQLDII ASPRLLASHL QPASIKQGSE IPYQVSSGES GATSVEFKEA 300
  301 VLGMEVTPTV LQKGRIRLKL HISQNVPGQV LQQADGEVLA IDKQEIETQV EVKSGETLAL 360
  361 GGIFTRKNKS GQDSVPLLGD IPWFGQLFRH DGKEDERREL VVFITPRLVS SE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle