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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HMDH_ASPTE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPVVRKPDP GGVQHRVTKA LRAIVGHACR HPIHTLLVTA LTAATTHLHV LEGTYQATHR  60
   61 EASAWKWQID DRPKVPEDGQ SDFHWALVTL DLPGASVDAS IPFLSNTLSG FLGAEQTTPT 120
  121 PDSSPSPDHS ALTFRVPYSQ LDGFLQAVEI IPSEKEDDSW RLRSPREEGS PRSLGHWLGS 180
  181 SWLSFLHRVH HAETVDLVII GLSYLAMNMT VVSLFRVMRH LGSRFWLAAS VLLSGAFAFV 240
  241 LGLGITTTCD VPVDMLLLFE GIPYLVLTVG FEKPIQLTRA VLCVSEELWG GGQRQVPNGA 300
  301 SSDDSRQNQL IPNIIQLAVD REGWYIVRSY LLEIGALALG AVLRPKDSLG HFCFLAAWTL 360
  361 LIDAVLLFTF YATILCVKLE ITRIRSPGGL GQVNAKHPSG IFGHKVKSTN ITWWKLLTVG 420
  421 GFVLCHFLQL SPFFYRVMGE YMANGTLPPT AVSPFKEAAN GLNEIYLTAR VEGFETRVTV 480
  481 LPPLQYVLES AGFNISATKR STFDGVLDGL ESPLGRLCLM GALVVSLVLN NHLIHAARWH 540
  541 AWPQARESAV PDGSYLSVPC SATAPEVCTR PPEETEALLK SNQAESLTDD ELVELCLRGK 600
  601 IAGYSLEKTL ERIAAGSSRS VTRLEAFTRA VRIRRAAVSK TPSTQNLCSG LAESLLPYRD 660
  661 YNYELVHGAC CENVVGYLPL PLGVAGPMVI DGQALFIPMA TTEGVLVASA SRGCKAINAG 720
  721 GGATTMLKGD GMTRGPCLRF PSAQRAAEAQ RWVESPLGHE VLAAAFNATS RFARLQTLTV 780
  781 AQAGIYLYIR FRTTTGDAMG MNMISKGVEK ALEAMAAEGG FPDMHTVTLS GNFCSDKKSA 840
  841 AINWIGGRGK SVIAEATIPA ETVRQVLKTD VDALVELNTA KNLVGSAMAG SLGGFNAHAS 900
  901 NLVQAVFLAT GQDPAQNVES SSCITTMKNI DGNLHIAVSM PSMEVGTIGG GTILEAQGAM 960
  961 LDLLGVRGAH STEPGANARR LARIVAAAVL AGELSTCAAL AAGHLVNAHM QHNRTSKDAI1020
 1021 SGTEYGAIRT PVYVVILEHA GDIHFVQIEY KNTYLRRKVP TLSCNLGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle