YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEMY_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVLLLFVL LIAGIVVGPM IAGHQGYVLI QTDNYNIETS VTGLAIILIL AMVVLFAIEW  60
   61 LLRRIFRTGA HTRGWFVGRK RRRARKQTEQ ALLKLAEGDY QQVEKLMAKN ADHAEQPVVN 120
  121 YLLAAEAAQQ RGDEARANQH LERAAELAGN DTIPVEITRV RLQLARNENH AARHGVDKLL 180
  181 EVTPRHPEVL RLAEQAYIRT GAWSSLLDII PSMAKAHVGD EEHRAMLEQQ AWIGLMDQAR 240
  241 ADNGSEGLRN WWKNQSRKTR HQVALQVAMA EHLIECDDHD TAQQIIIDGL KRQYDDRLLL 300
  301 PIPRLKTNNP EQLEKVLRQQ IKNVGDRPLL WSTLGQSLMK HGEWQEASLA FRAALKQRPD 360
  361 AYDYAWLADA LDRLHKPEEA AAMRRDGLML TLQNNPPQ

Type	Start	End	Confidence
Cytoplasmic	1	6	0.75
Transmembrane Helix	7	27	0.87
Non-Cytoplasmic	28	40	0.84
Transmembrane Helix	41	62	0.89
Cytoplasmic	63	398	0.94