YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLTK_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYEFDWSSIV PSLPYLLDGL VITLKITVTA VVIGILWGTM LAVMRLSSFA PVAWFAKAYV  60
   61 NVFRSIPLVM VLLWFYLIVP GFLQNVLGLS PKNDIRLISA MVAFSMFEAA YYSEIIRAGI 120
  121 QSISRGQSSA ALALGMTHWQ SMKLIILPQA FRAMVPLLLT QGIVLFQDTS LVYVLSLADF 180
  181 FRTASTIGER DGTQVEMILF AGFVYFVISL SASLLVSYLK RRTA

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.73
Transmembrane Helix	21	43	0.90
Cytoplasmic	44	59	0.69
Transmembrane Helix	60	83	0.82
Non-Cytoplasmic	84	94	0.72
Transmembrane Helix	95	115	0.74
Cytoplasmic	116	149	0.62
Transmembrane Helix	150	171	0.69
Non-Cytoplasmic	172	196	0.82
Transmembrane Helix	197	219	0.91
Cytoplasmic	220	224	0.91