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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG10000-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHAGGKYCGP RHCSFYIIAF LICQLFFLVI FIRNDDASSA NELLSFMNES EESDHLDWRV  60
   61 FISHTPETSE DFYQYNIHLS NALGLIRKLP VTRHHSCTTR NSILPAPLEA NVSVVISFHN 120
  121 EARSMLLRTI VSLLSRSPED YLHELILVDD GSQRDVTLLD DLKRWMGGVF GSRYRLGLTF 180
  181 LRNQERMGLI WSRNRGASLA SGRYVLFLDS HCEVNEGWLE PLLERLALNT NLAVSPLLDP 240
  241 IDPTTLSYRK GNELLKGGFD WSLHFHWLKR QLTNQESLEM PYQSPAFAGG VLMMSREWFL 300
  301 KLGSFNPYLK IWGGESIELA IKLWLCGGQI EIVPCSRIGH IFRRRHAFDF PPQSDRQLSP 360
  361 AQETYLHNSK IIAESWLDEY KNMFYALRPA ARRIPLDHTY DELQRMRKER RCHPFEWYLR 420
  421 HVSPELRMHF DELSATGTLR NEDRCVHARQ KDSQPILASC YLSDITQWSM LRQSGQLSTH 480
  481 RELCLAVGFG MRIALEPCGR NETVRRSQRW VRLGTHLLHA ESHLCLDNPL KDRLEMSTCR 540
  541 SHAVSQSFQF ALEMEGQT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle