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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4587-PC, CG4587-PD
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.69
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKHWSCFV AIVLGVLIFK MHIFVAFADQ DEDIPHNEVR NWALKFGVDL WEFGRQFTKM  60
   61 NEIKSRFKDN DIEVKRKDGI ILLRELAAEV KNFMDFKRNA VMRLMDSAEQ AALSELEGQG 120
  121 QAESPMGGQQ HYDARRINEY NADGKLADGA RHMDIRFMRR FERLPVNLSL SSILVPHGVD 180
  181 LDEPDVKSAL QWSGHLDPLF QNNLEQDPAL SWQYFGSSTG FLRRFPGTAW PPEGSKGSKL 240
  241 IHDFRTHNWF VQAASSPKDI MILLDASSSM TEKSFDLGMA TAFNILDTLG EDDFVNLITF 300
  301 SEVVKTPVPC FKDRMVRATP DNIQEIKSAV KAIKLQDTAN FTAGLEYAFS LLHKYNQSGA 360
  361 GSQCNQAIML ITESTSESHK DVIKQYNWPH MPVRIFTYLI GSDSGSRSNL HDMACSNKGF 420
  421 FVQINDYDEA RRKVIDYALV MARPMIMYQA DHPVHWSPVF VAGKSGGLGR DSEYQRRLVT 480
  481 TVSTPVFDRR NHSVRVANLL GVVGTDVPIE EIRKVIPQHK LGPNGYSFIV DNNGRVLYHP 540
  541 DLRPLGDANQ YIDQLKPKYA SVDITELELP ETEFGNNNEP IEINKNLLNE MRGDMIKPKE 600
  601 GETEFTVMNH YDDSKRVSTR THRYFYGPIE DTPFTLAIVL PEKYGSHEFV SQQEIRHSRN 660
  661 NVTEYFKGDN WRVHPDWVYC EYNSVSDLEK ERESSGEYSS RDQEPSFGSP EEQVRPKSPQ 720
  721 PHHNMHSGSN GGNAPGSSHF GSQHQSSQGS RKAEPYFCDR ALLQSLVRDA MVTDGLDRNT 780
  781 TGSSSGKEDK QQGYQKFVVA TSFVATRSGL LRWIDHVKRP EDTPEPHFSE DNVRAMDTSW 840
  841 YKRAIDQHSV EPDSFVYSVP FGSGYAIKSN ATLVTASHAI FVEHRGHKAA AGVVGLQFQH 900
  901 DSLAKHFINI TSACTGMTGC KRTCASDNLD CYVLDNSGFV IISEEMEHTG KFFGQIDGTI 960
  961 MDSLVQDRIY KRVTVNDYQG VCSDADNPYT AAGGILKPNR LGSWFFNHLL ALSAAWLSLM1020
 1021 PASLRAWPQE EYTYDNEDVV FVDNNYSDEY EFGNENEYNM QVDQEMDEFF TTADVEYTTP1080
 1081 PPRQHKPHVG PRFSPDPHNA RRCDLRTDLY MLQPERLNQG GQNNPLKGKL TNCHVSGCER1140
 1141 PFSVQKIPHS NLILLVVDTL CPCGSKQLDI EPLEEAGVIG ACSTRRQGQE QESRRRPKKC1200
 1201 INYHPEEIEI QQCGRGSTLL HMSGSVIVAH LLMVTVTFVL ANA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle