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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG4587-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRTFVLLL LIGCLIVGCC IAAPQGCGGG FYTKNGNLVI DVNNIQSHLD CRLMDSAEQA  60
   61 ALSELEGQGQ AESPMGGQQH YDARRINEYN ADGKLADGAR HMDIRFMRRF ERLPVNLSLS 120
  121 SILVPHGVDL DEPDVKSALQ WSGHLDPLFQ NNLEQDPALS WQYFGSSTGF LRRFPGTAWP 180
  181 PEGSKGSKLI HDFRTHNWFV QAASSPKDIM ILLDASSSMT EKSFDLGMAT AFNILDTLGE 240
  241 DDFVNLITFS EVVKTPVPCF KDRMVRATPD NIQEIKSAVK AIKLQDTANF TAGLEYAFSL 300
  301 LHKYNQSGAG SQCNQAIMLI TESTSESHKD VIKQYNWPHM PVRIFTYLIG SDSGSRSNLH 360
  361 DMACSNKGFF VQINDYDEAR RKVIDYALVM ARPMIMYQAD HPVHWSPVFV AGKSGGLGRD 420
  421 SEYQRRLVTT VSTPVFDRRN HSVRVANLLG VVGTDVPIEE IRKVIPQHKL GPNGYSFIVD 480
  481 NNGRVLYHPD LRPLGDANQY IDQLKPKYAS VDITELELPE TEFGNNNEPI EINKNLLNEM 540
  541 RGDMIKPKEG ETEFTVMNHY DDSKRVSTRT HRYFYGPIED TPFTLAIVLP EKYGSHEFVS 600
  601 QQEIRHSRNN VTEYFKGDNW RVHPDWVYCE YNSVSDLEKE RESSGEYSSR DQEPSFGSPE 660
  661 EQVLHFLSRA GRPGWKWMSV RPKSPQPHHN MHSGSNGGNA PGSSHFGSQH QSSQGSRKAE 720
  721 PYFCDRALLQ SLVRDAMVTD GLDRNTTGSS SGKEDKQQGY QKFVVATSFV ATRSGLLRWI 780
  781 DHVKRPEDTP EPHFSEDNVR AMDTSWYKRA IDQHSVEPDS FVYSVPFGSG YAIKSNATLV 840
  841 TASHAIFVEH RGHKAAAGVV GLQFQHDSLA KHFINITSAC TGMTGCKRTC ASDNLDCYVL 900
  901 DNSGFVIISE EMEHTGKFFG QIDGTIMDSL VQDRIYKRVT VNDYQGVCSD ADNPYTAAGG 960
  961 ILKPNRLGSW FFNHLLALSA AWLSLMPASL RAWPQEEYTY DNEDVVFVDN NYSDEYEFGN1020
 1021 ENEYNMQVDQ EMDEFFTTAD VEYTTPPPRQ HKPHVGPRFS PDPHNARRCD LRTDLYMLQP1080
 1081 ERLNQGGQNN PLKGKLTNCH VSGCERPFSV QKIPHSNLIL LVVDTLCPCG SKQLDIEPLE1140
 1141 EAGVIGACST RRQGQEQESR RRPKKCINYH PEEIEIQQCG RGSTLLHMSG SVIVAHLLMV1200
 1201 TVTFVLANA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle