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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FA5_PIG
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPALPCPWV LVVLGTSWAA WGNLGTEAAR VRQFYVAAQS ISWNYHPEPT HPSSSPFATS  60
   61 FKKIVYREYE AYFQKEKPPS RMSGLLGPTL YADVGDIMKV HFRNKADKPL SIHPQGIKYS 120
  121 KFAEGASYPD HTFLVEKMDD AVAPGQEYTY EWNISEDSGP THNDPPCLTH IYYSYENLIQ 180
  181 DFNSGLIGPL LICKKGTLTE DGIQKMFDKQ YVLMFAVFDE SKSWNQSSSL MYTVNGYVNG 240
  241 TMPDITVCAY DHISWHLIGM SSGPELFSIH FSGQVLEQNH HKVSAITLVS ATSTTANMTV 300
  301 SPEGKWPISS LIPKHFQAGM QAYIDIKNCA KKTRKPKKLT RDQRRHIKRW EYFIAAEEVI 360
  361 WDYAPIIPAN MDKKYRSLHL DNFSNQIGKH YKKVVYKQYQ DESFTKRLEN PNNKEDGILG 420
  421 PVIRAQVRDT LKIVFKNMAS RSYSIYPHGV TFSPYEDDVN SSSTSDNNTM IRAVQPGETY 480
  481 TYKWNILESD EPTENDAQCL TRPYYSNVDI TRDIASGLIG LLLICKSRSL DKRGIQRTAD 540
  541 IEQKAVFAVF DENKSWYIED NIYKFCENPE KVKRDDPKFY ESNIMSTING YVPESIPTLG 600
  601 FCFDDTVQWH FCSVRTHDNI LTIHFTGHSF IYGKRHEDTL TLFPMRGESV TVTMDNVGTW 660
  661 MLTTMNSNPR NKKLQLKFRD VKCIRDDDED SYEIIYEPSS STTLTTRKMH DSSENKEEEN 720
  721 DDEYDYQDLL ASVLGIRSFR NSSLYQEDDE FNLTALALEN NSEFIPPSTD RAVDSNSSSP 780
  781 GNISRAPANT FTEPRKILPH PEATKAGSPR RHTGLVKNLV LNRRRTQHSD PYSEDPIENP 840
  841 LQSVITGISL LPFGTEGFRN REHPKHKRFK AGRDQAAKHR FSQMEFPAHK TGRHISQDNS 900
  901 SSSSMGPLED LSSDLLLLER KDPSTINGKW HLVSEKGSYE IVQDADEDMA VNKLPNNPQN 960
  961 ASRSWGENIP FTNKHGKQRG HPIFVTRHKL LQERQDEGNS ILKKGRFFIR TRRKKKERKP1020
 1021 VHHVPLSPRS FNPLRGEANT PFSDRRQNHS LLLHESNETF PPTDLNQTFP SMNLSLIASH1080
 1081 PDHNQNLPND THQTSSPLDL YQTVTPDEPY QTAPIQDLDP THSTAVPSHQ SSLPEPIQMH1140
 1141 DYDLRNKASP TDVSEMFFSL KLKAGHRTTS PDLNQTSLSP ELSQTTLSPD PGHVTLSPDL1200
 1201 SQTTLSPDLS HTTLSPDLGH TTLSPDLSHT TLSPDLSQTT LSPDLSHTTL SPDLGHTTLS1260
 1261 PDLSHTTLSP DLGHATLSPD LSHTTLSPDL GHTTLSPDLG HTTLSPDFSQ TTLSPDLGHT1320
 1321 TLSSDVSHTT LSPDLSHTTL SPDLSHTTLS PDLGHTTLSP DLSQTTLSPD LGHMTLSPDL1380
 1381 SHTTLSPDLG HTTLSPDLSH TTLSPDLGHM TLSPDLGQTT LSLDFGQTTL SPDLSHMTLS1440
 1441 SELSHETLSP DLSQVTLSPD LSEIPFSPDL WQTTLSSDLN ETTLSPDLRQ TSPHPDPDKT1500
 1501 SYISESSQSV TLPEFGQTSP FPDLGQRPSP PSHSTLNNTF IPREFNPMVV VGLSRDDGDY1560
 1561 VEIIPRQQEE NSEEDYVKID YVEYDDPYQT DVRTDINSSR NPDNIAAWYL RSNNGNRRNY1620
 1621 YIAAEELSWD YSKFTQREDI DDVPEHTIYK KVVFRKYLDS TFTKLDPRGE YEEHLGILGP1680
 1681 IIRAEVDDVI QVRFKNLASR PYSLHAHGLS YEKSSEGKTY EDDSPEWFKE DNAVQPNSSY1740
 1741 TYVWHATERS GPESPGSACR AWAYYSAVNP EKDIHSGLIG PLLICRKGTL HKENNMPVDM1800
 1801 REFVLLFMVF DEKKSWYYEK KFTRSWRLTS SEVKNSHKFH AINGMIYNLP GLRMYEQEWV1860
 1861 RLHLLNLGGS RDIHVVHFHG QTLLENGTQQ HQLGVWPLLP GSFKTLEMKT SKAGWWLLDT1920
 1921 EVGENQRAGM QTPFLIIDRE CKMPMGLSTG LIADSQIKAS EFWGHWQPKL ARLNNGGSYN1980
 1981 AWITDKFSGE SNSKPWIQVD MQREVVFTGI QTQGAKYYLK SYYTTEFNVA YSSDQRNWRI2040
 2041 FKGNSTKNVM YFNGNSDAST ITENQFDPPV VARYIRISPT ESYNKPALRL ELQGCEVNGC2100
 2101 STPLGMESGN IKNEQITASS FKKSWWGDYW EPFRARLNAQ GRVNAWQAKA NNNNQWLQID2160
 2161 LLKIKKITAI TTQGCKSLSS EMYVKRYTIQ YSDRGVEWKS YREKSSMVDK IFEGNNNIKG2220
 2221 HVKNFFNPPI ISRFIRIIPK MWNQSIALRL ELFGCDIY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle