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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ETR1_PRUPE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEACNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLELI YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFSMHS RTVAIVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRH TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LQLSYTLRQQ NPVGYTVPIH LPVINQVFSS NRALKISPNS PVARMRPLAG 240
  241 KHMPGEVVAV RVPLLHLSNF QINDWPELST KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR DLLMEQNIAL DLARREAETA IRARNDFLAV MNHEMRTPMH 360
  361 AIIALSSLLQ ETELTPEQRL MVETILKSSH LLATLINDVL DLSRLEDGSL QLEIATFNLH 420
  421 SVFREVHNLI KPVASVKKLS VSLNLAADLP VQAVGDEKRL MQIVLNVVGN AVKFSKEGSI 480
  481 SITAFVAKSE SLRDFRAPEF FPAQSDNHFY LRVQVKDSGS GINPQDIPKL FTKFAQTQSL 540
  541 ATRNSGGSGL GLAICKRFVN LMEGHIWIES EGPGKGCTAI FIVKLGFAER SNESKLPFLT 600
  601 KVQANHVQTN FPGLKVLVMD DNGSVTKGLL VHLGCDVTTV SSIDEFLHVI SQEHKVVFMD 660
  661 VCMPGIDGYE LAVRIHEKFT KRHERPVLVA LTGNIDKMTK ENCMRVGMDG VILKPVSVDK 720
  721 MRSVLSELLE HRVLFEAM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle