YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ELAB_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNQFGDTRI DDDLTLLSET LEEVLRSSGD PADQKYVELK ARAEKALDDV KKRVSQASDS  60
   61 YYYRAKQAVY RADDYVHEKP WQGIGVGAAV GLVLGLLLAR R

Type	Start	End	Confidence
Non-Cytoplasmic	1	80	0.59
Transmembrane Helix	81	99	0.76
Cytoplasmic	100	101	0.33