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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DPPA_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISLKKSGM LKLGLSLVAM TVAASVQAKT LVYCSEGSPE GFNPQLFTSG TTYDASSVPL  60
   61 YNRLVEFKIG TTEVIPGLAE KWEVSEDGKT YTFHLRKGVK WHDNKEFKPT RELNADDVVF 120
  121 SFDRQKNAQN PYHKVSGGSY EYFEGMGLPE LISEVKKVDD NTVQFVLTRP EAPFLADLAM 180
  181 DFASILSKEY ADAMMKAGTP EKLDLNPIGT GPFQLQQYQK DSRIRYKAFD GYWGTKPQID 240
  241 TLVFSITPDA SVRYAKLQKN ECQVMPYPNP ADIARMKQDK SINLMEMPGL NVGYLSYNVQ 300
  301 KKPLDDVKVR QALTYAVNKD AIIKAVYQGA GVSAKNLIPP TMWGYNDDVQ DYTYDPEKAK 360
  361 ALLKEAGLEK GFSIDLWAMP VQRPYNPNAR RMAEMIQADW AKVGVQAKIV TYEWGEYLKR 420
  421 AKDGEHQTVM MGWTGDNGDP DNFFATLFSC AASEQGSNYS KWCYKPFEDL IQPARATDDH 480
  481 NKRVELYKQA QVVMHDQAPA LIIAHSTVFE PVRKEVKGYV VDPLGKHHFE NVSIE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle