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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DEGP1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTTSCSLL LSSTLFLHSP PSSHLSFFNL SSSRSSPISL YPIRSKRYFR ILSKLSLNDN  60
   61 NRDDDDDTLH FTPFSAVKPF FLLCTSVALS FSLFAASPAV ESASAFVVST PKKLQTDELA 120
  121 TVRLFQENTP SVVYITNLAV RQDAFTLDVL EVPQGSGSGF VWDKQGHIVT NYHVIRGASD 180
  181 LRVTLADQTT FDAKVVGFDQ DKDVAVLRID APKNKLRPIP VGVSADLLVG QKVFAIGNPF 240
  241 GLDHTLTTGV ISGLRREISS AATGRPIQDV IQTDAAINPG NSGGPLLDSS GTLIGINTAI 300
  301 YSPSGASSGV GFSIPVDTVG GIVDQLVRFG KVTRPILGIK FAPDQSVEQL GVSGVLVLDA 360
  361 PPSGPAGKAG LQSTKRDGYG RLVLGDIITS VNGTKVSNGS DLYRILDQCK VGDEVTVEVL 420
  421 RGDHKEKISV TLEPKPDES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle