YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DACD_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRLIIAAS LFVFNLSSGF AAENIPFSPQ PPEIHAGSWV LMDYTTGQIL TAGNEHQQRN  60
   61 PASLTKLMTG YVVDRAIDSH RITPDDIVTV GRDAWAKDNP VFVGSSLMFL KEGDRVSVRD 120
  121 LSRGLIVDSG NDACVALADY IAGGQRQFVE MMNNYAEKLH LKDTHFETVH GLDAPGQHSS 180
  181 AYDLAVLSRA IIHGEPEFYH MYSEKSLTWN GITQQNRNGL LWDKTMNVDG LKTGHTSGAG 240
  241 FNLIASAVDG QRRLIAVVMG ADSAKGREEE ARKLLRWGQQ NFTTVQILHR GKKVGTERIW 300
  301 YGDKENIDLG TEQEFWMVLP KAEIPHIKAK YTLDGKELTA PISAHQRVGE IELYDRDKQV 360
  361 AHWPLVTLES VGEGSMFSRL SDYFHHKA

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	388	0.99