YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE41525
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLFLFFFPE LPTPSTPQTV EYVPASINGP HGCANYGLCT DVTTTLVSST NISVIYEYGC  60
   61 DPDNCYCLEG TTNGTEPCDT IEDQCGNNPC GDPKYFLCTS KIKSYSCSCK PGFTGNDCKS 120
  121 ELGSACATSP CRSGATCESV DNSTAGYKCI CKWNQMGENC EYDNFCANPQ CQNNGNCSMV 180
  181 VDNANWICSC PPGWQGRRCE TPDTVTTPPV WDGCYKYNFQ SIGATTTKFS DNQLTVDKCN 240
  241 KYALQQSSDT VTMNYLTLCG GFCMVSEGPL CNDTSNWDDD CKKKCGGNNN EFCGVLNKRC 300
  301 IVYEAGTAEV DENACDNSTF CSADLGQGLC INWQSDFTDG YACICKPLWT GRNCENPVPE 360
  361 ACTPSPCLNG TCVLNDQYNK FTCVCDDGFF GDKCQYSDIC TSATCLYGGT CTELNNGDYK 420
  421 CDCLLQYFGK NCEVINRCDY GKPCNNGKCA STIDGITTNY TCTCDDGWTG TNCDTMIDFC 480
  481 IPNPCSYNST CKPKFKGYDC TCITGLTGVN CSTIIDLCVP YKDSTGKWIK TPCNSKDDMA 540
  541 NCTKGINTLT CSCGDKWTDT LCDLNILIKD VLMAIYGYVD LTMISLLNDL MQNPSQIKDM 600
  601 VPFITGLLTD SERSDLSWDA GDLFNWIAFE DQRLDLKWVF GGFLGENRDI HKWNDVVLGN 660
  661 CFTFNHRDRN FTYRLRSSGR HGGRNFRQKY LKIKFFTTGI QAFMKTRQDE YAPWYDTAAI 720
  721 NVFIHNRDDY VFSESVRYNA QPNAQSTMNI FMTRYTRLGG RYGKCVKKPS EVKNYYYPGA 780
  781 YTTDGCLRTC YQDRMKQECN CMDPRYPQAP GNVTSCQLSE RSCVTVASEA AGDPSKWWDC 840
  841 VCPLPCSNQE YSVTWSKANF VNLPIICGKS SDVSTCKAHY IDQLMVSIVL PQLDFKIYAE 900
  901 NPAMDFNKFL SQLGGQLGVL MGINLVTFIE VVFLLFGLFT LCCKKYGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle