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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tag-336
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFLLFLIFP YYSTPQTTVE YVAASPNPPH GCPNFGLCTD VTTTLVSSTN VSTTYEYGCA  60
   61 PENCYCVDGT TNGTEPCDTI VDQCGDDPCG EPEYFLCTSK IESHTCACQA GYTGADCTSE 120
  121 LGTACATSPC RSGATCVSSN SSATTEYSCI CTDQQFGTHC EYDNLCASNP CQNSGNCTMV 180
  181 LENSNYLCTC SPDWQGRRCE VADAVSTPPV QDGCYLYDTG SIGACTTKFT ENSLTSSKCN 240
  241 NYALEQSTDT VTMNYLTLCG AWCMVSEAPL CNTSWYMDGD CKKSCGGDSA EYCGRLNSRC 300
  301 IVYEAGTSET DANACTDNST LCNANLGQGI CINLSSDVTN GYQCICGPLW TDTDCETPVA 360
  361 SACTPSPCWN GICVLNEQYN TYTCACDDGY FGDLCQYPDV CTSSTCLYGG TCTETSSGGY 420
  421 TCSCLSQYFG TNCEEINRCN YADPCVNGDC QTTVDGITTN YTCTCDSGWT GENCDTMIDY 480
  481 CIPNPCSYNS TCSPYFKGFN CTCITGLTGA NCSTIIDLCV PYKDSTGKWI KSPCNSKDDL 540
  541 ANCTIEINGF NCSCSDKWTD TLCDLNVLIK DVLLTIYGHV DLTMITLLND LMQNPSQIKD 600
  601 MVPFITGLLS DSERSDLSWD VGDLFNWIAF EDQRLDLEND IYKWNDVVLG NCFTFNHQDQ 660
  661 NFTYLMRRPG RHGGIQAFMK TRQDEYAPWY DTAGMLVFIH NREDYVFSES VRYNAQPNAQ 720
  721 STINIFMTRY TRLGGRYGKC VKKPSEVKNY YYPGAYTTDG CLRTCYQDRM QQECQCMDPR 780
  781 YPKAPNATSC QLSERSCVTE ASDAAGDPST WSSCVCPLPC SNQEYSVTWS KANFVNMPIT 840
  841 CEKSSDVATC QANYVDQLMV SIVLPKLDFQ IYAETPAMDF NKFLSQLGGQ LGVLMGINLV 900
  901 TFIEVVFLMF GVLTICCRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle