YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CY1_NEUCR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.34
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLARTCLRST RTFASAKNGA FKFAKRSAST QSSGAAAESP LRLNIAAAAA TAVAAGSIAW  60
   61 YYHLYGFASA MTPAEEGLHA TKYPWVHEQW LKTFDHQALR RGFQVYREVC ASCHSLSRVP 120
  121 YRALVGTILT VDEAKALAEE NEYDTEPNDQ GEIEKRPGKL SDYLPDPYKN DEAARFANNG 180
  181 ALPPDLSLIV KARHGGCDYI FSLLTGYPDE PPAGASVGAG LNFNPYFPGT GIAMARVLYD 240
  241 GLVDYEDGTP ASTSQMAKDV VEFLNWAAEP EMDDRKRMGM KVLVVTSVLF ALSVYVKRYK 300
  301 WAWLKSRKIV YDPPKSPPPA TNLALPQQRA KS

Type	Start	End	Confidence
Signal Peptide	1	59	0.43
N-region	1	50
H-region	51	56
C-region	57	59
Cleavage Site	59	60
Non-Cytoplasmic	60	332	0.86