YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|156230241, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKTPVVVFT SLSLLLSLSC AGDVKSRSCS DVRLAFTTKG FSLHNVPHQE ISGEHLRVCA  60
   61 QGYTCCTSDM EDQLGQQSKL DFERLVDDSS RNIRTTFTSR HKKFDEFFLE LLDNSEKSLN 120
  121 DMFVRTYGKL YTHNSEMFED LFSELKRYYT GGNVNLEEVL NDFWSRLLER MFQLLNSQFT 180
  181 FSDDYLECIS KYTDQLKPFG DVPRKLKAQV TKAFIAARSF VQGLMVGREV ANRVAKVNIS 240
  241 PGCSKALTKM WYCPYCGGMS GLKPCANYCQ NVMRGCLANQ ADLDPEWNLF IDAMLLVADR 300
  301 LEGPFNIEAV MEPIDVKISE AIMTMQDNSM QVSSKVFQGC GHPKAASVGR SARGISDVFN 360
  361 SRFKPFNSPE ERPTTAAGTS LDRLRIVWRT MQHSVVDIKE KLKESRRFWS SLPDSICAED 420
  421 EMTDPDEEQC WNSHTRGRYF PEVVKDGLTN QLNNPEVEVD ITRPDTFIRQ QIMTLRVMTN 480
  481 KLRNAYNGKD VYFQDSSDEE SGSGSGSGFT TEPEVVHTEP PMLEADKSDP QPPTDAGSVQ 540
  541 QKPSVTVLSI PALLLLLLLC WR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle