YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLLLAVFI GGGTGSVARW LLSMRFNPLH QAIPLGTLTA NLIGAFIIGI GFAWFSRMTN  60
   61 IDPVWKVLIT TGFCGGLTTF STFSAEVVFL LQEGRFGWAL LNVFVNLLGS FAMTALAFWL 120
  121 FSASTAH

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.46
Transmembrane Helix	5	23	0.83
Cytoplasmic	24	31	0.49
Transmembrane Helix	32	55	0.89
Non-Cytoplasmic	56	66	0.45
Transmembrane Helix	67	90	0.86
Cytoplasmic	91	97	0.46
Transmembrane Helix	98	121	0.90
Non-Cytoplasmic	122	127	0.46