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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLV1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMRLLKTHL LFLHLYLFFS PCFAYTDMEV LLNLKSSMIG PKGHGLHDWI HSSSPDAHCS  60
   61 FSGVSCDDDA RVISLNVSFT PLFGTISPEI GMLTHLVNLT LAANNFTGEL PLEMKSLTSL 120
  121 KVLNISNNGN LTGTFPGEIL KAMVDLEVLD TYNNNFNGKL PPEMSELKKL KYLSFGGNFF 180
  181 SGEIPESYGD IQSLEYLGLN GAGLSGKSPA FLSRLKNLRE MYIGYYNSYT GGVPPEFGGL 240
  241 TKLEILDMAS CTLTGEIPTS LSNLKHLHTL FLHINNLTGH IPPELSGLVS LKSLDLSINQ 300
  301 LTGEIPQSFI NLGNITLINL FRNNLYGQIP EAIGELPKLE VFEVWENNFT LQLPANLGRN 360
  361 GNLIKLDVSD NHLTGLIPKD LCRGEKLEML ILSNNFFFGP IPEELGKCKS LTKIRIVKNL 420
  421 LNGTVPAGLF NLPLVTIIEL TDNFFSGELP VTMSGDVLDQ IYLSNNWFSG EIPPAIGNFP 480
  481 NLQTLFLDRN RFRGNIPREI FELKHLSRIN TSANNITGGI PDSISRCSTL ISVDLSRNRI 540
  541 NGEIPKGINN VKNLGTLNIS GNQLTGSIPT GIGNMTSLTT LDLSFNDLSG RVPLGGQFLV 600
  601 FNETSFAGNT YLCLPHRVSC PTRPGQTSDH NHTALFSPSR IVITVIAAIT GLILISVAIR 660
  661 QMNKKKNQKS LAWKLTAFQK LDFKSEDVLE CLKEENIIGK GGAGIVYRGS MPNNVDVAIK 720
  721 RLVGRGTGRS DHGFTAEIQT LGRIRHRHIV RLLGYVANKD TNLLLYEYMP NGSLGELLHG 780
  781 SKGGHLQWET RHRVAVEAAK GLCYLHHDCS PLILHRDVKS NNILLDSDFE AHVADFGLAK 840
  841 FLVDGAASEC MSSIAGSYGY IAPEYAYTLK VDEKSDVYSF GVVLLELIAG KKPVGEFGEG 900
  901 VDIVRWVRNT EEEITQPSDA AIVVAIVDPR LTGYPLTSVI HVFKIAMMCV EEEAAARPTM 960
  961 REVVHMLTNP PKSVANLIAF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle