YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CITG_VIBCM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIPAALDLL LELPSQASSS SGSRTFSLPR LVGHLAYHAM MLEVHLTPKP GLVDTANNGA  60
   61 HRDMDLNTFI ASAEAIAPYL HSFVSAGWES AGNPAAQLLS ALRPIGIEAE QAMFAATQGV 120
  121 NTHKGMIFIL GLICGSVGWL KANQLKIDAQ HIGETIRQAC QFLVIDELKA KRDCEPETAG 180
  181 ERIYRQYGLT GARGEAASGL AMVMQHALPA YQACLTKGAS TEQALWHTLL VLMANNNDSN 240
  241 LVSRGGLAGL HFVQEQAQQL LAKGGFLYQE IEQALTALDS VLIEKHLSPG GSADLLAATW 300
  301 LIYELVQLFK VRH

Type	Start	End	Confidence
Signal Peptide	1	19	0.81
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	313	0.95