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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHS2_EXODE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYNRLGSPQ RDGPYSPSAQ PQYDSRSPSP GRPLQPYIHP DEAYARQQPL HLQMPTASDD  60
   61 RLAMQPTYSV ENVHNPQAYG QQYGQHLPDS GDMGYGRNDY IVSPEEHHDA YYTQPYSPHP 120
  121 QGDYALDPYP SHDEPYRPDT DNVPILQPDS AYGPDPHTQP GMDYDDYQEE PRPTPSPAPI 180
  181 RRWKTVKEVQ LFNGNLVLDC PVPPKLLANV PHAKPPERDE FTHMRYSAAT CDPSDFHNER 240
  241 FTLRQRLFAK PRQTELFIVV TMYNEDEFLF ARTMIGVFKN IEFMCNRSSS KTWGKEAWKK 300
  301 IVVCIVSDGR AKINPRTRAV LAGLGVYQDG IAKQQVNGKD VTAHIYEYTT QVGLELKGTQ 360
  361 VSLKPRSATP VQLLFCLKEK NQKKINSHRW FFQAFGRVLD PNICVLIDAG TKPGKDSIYQ 420
  421 LWKAFDLEPM CGGACGEIKV MLDHGKKLLN PLVATQNFEY KMSNILDKPL ESAFGFISVL 480
  481 PGAFCAYRYV ALQNDKNGVG PLEKYFKGET MHADAGVFTA NMYLAEDRIL CFELVSKRNC 540
  541 RWILQYVKSA TGETDVPDRI PEFVLQRRRW LNGSFFAAVY AVAHVYQLWR TDHSFLRKLM 600
  601 FLIEFTYQTI NMLFAWFAIG NFFLVFRLLT ASLGTKETLG TAGTVLGVVF EFVYLGTLLY 660
  661 CFILSMGNRP QGNPKSYMMM VIFWSVLMVW LTFASIFLTV KSIETEVQQK DFSFSTIFNN 720
  721 STFFGLIVSL ASTYVLWFVA SFLFFDPWHM FTCFLQYIVL TPTYINVLNI YAFCNTHDIT 780
  781 WGTKGDDKAE KLPSANVKPG GKVDVLIPQD DGDLNAQYDS ELKKFATKPP KEVKAPNPAD 840
  841 KQEDYYKSFR SNVVTAWMIT NFILVAAVLN IAGFDRINVH DTQQQNSTIY LAVILWSVAG 900
  901 LSLFRFTGAC WFLVVRMVSL EIWSVCKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle