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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHRD_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEGLLWILL SVIIASVHGS RLKTPALPIQ PEREPMISKG LSGCSFGGRF YSLEDTWHPD  60
   61 LGEPFGVMHC VMCHCEPQRS RRGKVFGKVS CRNMKQDCPD PTCDDPVLLP GHCCKTCPKG 120
  121 DSGRKEVESL FDFFQEKDDD LHKSYNDRSY ISSEDTSTRD STTTDFVALL TGVTDSWLPS 180
  181 SSGVARARFT LSRTSLTFSI TFQRINRPSL IAFLDTDGNT AFEFRVPQAD NDMICGIWKN 240
  241 VPKPHMRQLE AEQLHVSMTT ADNRKEELQG RIIKHRALFA ETFSAILTSD EVHSGMGGIA 300
  301 MLTLSDTENN LHFILIMQGL VPPGSSKVPV RVKLQYRQHL LREIRANITA DDSDFAEVLA 360
  361 DLNSRELFWL SRGQLQISVQ TEGQTLRHIS GFISGRRSCD TLQSVLSSGA ALTAGQTGGV 420
  421 GSAVFTLHPN GSLDYQLLVA GLSSAVLSVS IEMKPRRRNK RSVLYELSAV FTDQRAAGSC 480
  481 GRVEARHTHM LLQNELFINI ATALQPDGEL RGQIRLLPYN GLDARRNELP VPLAGVLVSP 540
  541 PVRTGAAGHA WVSVDPQCHL HYEIIVNGLS KSEDASISAH LHGLAEIGEM DDSSTNHKRL 600
  601 LTGFYGQQAQ GVLKDISVEL LRHLNEGTAY LQVSTKMNPR GEIRGRIHVP NHCESPAPRA 660
  661 EFLEEPEFED LLFTREPTEL RKDTHTHVHS CFFEGEQHTH GSQWTPQYNT CFTCTCQKKT 720
  721 VICDPVMCPT LSCTHTVQPE DQCCPICEEK KESKETAAVE KVEENPEGCY FEGDQKMHAP 780
  781 GTTWHPFVPP FGYIKCAVCT CKGSTGEVHC EKVTCPPLTC SRPIRRNPSD CCKECPPEET 840
  841 PPLEDEEMMQ ADGTRLCKFG KNYYQNSEHW HPSVPLVGEM KCITCWCDHG VTKCQRKQCP 900
  901 LLSCRNPIRT EGKCCPECIE DFMEKEEMAK MAEKKKSWRH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle