YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI4_BRANA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTKLSLVL FLCFLGLYSE TVKSQNCGCA PNLCCSQFGY CGSTDAYCGT GCRSGPCRSP  60
   61 GGTPSPPGGG SVGSIVTQAF FNGIINQAGG GCAGKNFYTR DSFINAANTF PNFANSVTRR 120
  121 EIATMFAHFT HETGHFCYIE EINGASRDYC DENNRQYPCA PGKGYFGRGP IQLSWNYNYG 180
  181 ACGQSLNLNL LGQPELVSSN PTVAFRTGLW FWMNSVRPVL NQGFGATIRA INGMECNGGN 240
  241 SGAVNARIRY YRDYCGQLGV DPGPNLSC

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	268	0.99